We are proud to present the next-generation of genetic systems design at our new web interface. Try it out!

The Small RNA Calculator

Click here to try an example!

Title


Small RNA Sequence [?]
Small RNA Sequence: enter the nucleotide sequence of a small RNA that binds to mRNA and regulates translation initiation, using A/G/C/T/U. (required).


mRNA Sequence [?]
mRNA Sequence: enter the nucleotide sequence of an mRNA transcript, using A/G/C/T/U. (required)


Organism or (16S rRNA) [?]
Organism or 16S rRNA sequence: choose a bacterial species by typing in the first 3 letters of its name and selecting it from the list. Alternatively, you may enter the last 9 nucleotides of the 16S rRNA, using A/G/C/T/U.
(required)
(start typing)

For Non-Commercial Use Only
Design Jobs: 2 queued, 4 currently running
Developed by Amin Espah Borujeni and Howard Salis.
Please inquire about proper citation before using these results in a publication.
Have a Question? Our Documentation, Publications, and References may have your answer!
We gratefully acknowledge research funding from the Defense Advanced Research Projects Agency, the National Science Foundation, the Office of Naval Research, and an Amazon AWS Research Grant.
Computational resources are provided by the AWS Elastic Compute Cloud.
Method online since January 10th, 2011.